autoMLST: Automated Multi-Locus Species Tree
Automated Multi-Locus Species Tree. Upload sequence(s) for automatic generation of species phylogeny with reference organisms. Start Analysis » View example »
autoMLST: Automated Multi-Locus Species Tree - Ziemert lab
autoMLST can create either a concatenated alignment or a coalescent tree. Concatenated alignment: the standard MLSA. This strategy performs better if most gene trees don't diverge …
autoMLST: Automated Multi-Locus Species Tree - Ziemert lab
Placement Mode: Automatically add your sequences to reference gene trees and compute coalescent species tree (fastest mode)
autoMLST: Automated Multi-Locus Species Tree - Ziemert lab
Download. autoMLST is free and open source with no login requirement. Find custom installation instructions at our git repository: https://bitbucket.org/ziemertlab ...
autoMLST: Automated Multi-Locus Species Tree - Ziemert lab
Toggle navigation autoMLST: Automated Multi-Locus Species Tree autoMLST. Analyze; Results; Download; About/Help; View Job. View report » ...
autoMLST: Automated Multi-Locus Species Tree - Ziemert lab
Nguyen,L.T., Schmidt,H.A., Von Haeseler,A. and Minh,B.Q. (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Mol. Biol. Evol., 32, …
autoMLST: Automated Multi-Locus Species Tree
Query organism Reference assembly ID Reference name Mash distance estimated ANI P-value Genus Order Type strain
autoMLST: Automated Multi-Locus Species Tree
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