ATAC-seq (A ssay for T ransposase- A ccessible C hromatin using seq uencing) is a technique used in molecular biology to assess genome-wide chromatin accessibility. [1]

With the rapid development of single-cell technology, open chromatin regions that play essential roles in epigenetic regulation have been measured at the single-cell level using single-cell …

In this article, we focus on the single-cell ATAC-Seq (scATAC-Seq) technology to describe how it works and highlight the benefits and the drawbacks of scATAC-Seq relative to bulk ATAC …

Mar 30, 2025 · The Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq) technology has been widely used to capture chromatin accessibility in various cell types and …

Oct 11, 2022 · To integrate advantages of long-read sequencing into scATAC-seq, we developed single-cell assay for transposase‐accessible chromatin on Nanopore sequencing platform …

Jun 12, 2020 · Single-cell ATAC-seq (scATAC-seq) technology has also been developed to study cell type-specific chromatin accessibility in tissue samples containing a heterogeneous cellular …

Jul 11, 2024 · Single-cell Assay for Transposase-Accessible Chromatin using sequencing (scATAC-seq) analysis is a method to decipher the chromatin states of the analyzed cells. In …

ATAC-seq is compatible with a number of methods for cell separation and isolation, including cell sorting as well as disruption of intact tissues to cellular suspensions. The method has also …

What is Single-Cell ATAC Sequencing (scATAC-seq)? Single-cell ATAC-seq (Assay for Transposase-Accessible Chromatin using sequencing) is an innovative technique that enables …

1 day ago · IceQream (IQ) is a transparent, robust tool for predicting chromatin accessibility from DNA sequences using mechanistic models of transcription factor binding. Unlike black-box …