An htmlwidget version of igv, for RStudio and Shiny apps gladkia.github.io/igvShiny/ License Unknown, MIT licenses found Licenses found. Unknown. LICENSE. MIT. LICENSE.md. 38 stars 25 forks Branches Tags Activity. Star Notifications You must be signed in to change notification settings. Code; Issues 7; Pull requests 0; Actions;

Oct 29, 2024 · The igvShiny package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.

This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.

igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data)

We need a local directory to write files - for instance, a vcf file representing a genomic region of interest. We then tell shiny about that directory, so that shiny's built-in http server can serve up files we write there, ultimately consumed by igv.js.

The igvShiny package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps.

Aug 29, 2024 · Description This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of IGV. It can be used as a module in Shiny apps. URL https://github.com/gladkia/igvShiny, https://gladkia.github.io/igvShiny/ BugReports https://github.com/gladkia/igvShiny/issues Depends GenomicRanges, methods, shiny

R Shiny HTMLWidget wrapper for IGV.js. Contribute to TomlinsLab/ShinyIGV development by creating an account on GitHub.

igvShiny: igvShiny: a wrapper of Integrative Genomics Viewer (IGV - an interactive tool for visualization and exploration integrated genomic data) This package is a wrapper of Integrative Genomics Viewer (IGV). It comprises an htmlwidget version of …

This function is called in the server function of your shiny app Usage igvShiny ( genomeOptions , width = NULL , height = NULL , elementId = NULL , displayMode = "squished" , tracks = list ( ) )